Dca2147.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10706)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2147.1 |
23 |
643 |
643 |
44.79 |
621 |
43 |
3e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
45 |
703 |
1501 |
43.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2147.1 |
276 |
641 |
643 |
19.75 |
366 |
34 |
5e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
21 |
390 |
707 |
52.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10706 |
Augustus |
mRNA |
10736 |
12859 |
. |
- |
. |
ID=Dca2147.1;Parent=Dca2147 |
| scaffold10706 |
Augustus |
exon |
10736 |
11904 |
. |
- |
. |
ID=Dca2147.1.exon1;Parent=Dca2147.1 |
| scaffold10706 |
Augustus |
exon |
11983 |
12675 |
. |
- |
. |
ID=Dca2147.1.exon2;Parent=Dca2147.1 |
| scaffold10706 |
Augustus |
exon |
12790 |
12859 |
. |
- |
. |
ID=Dca2147.1.exon3;Parent=Dca2147.1 |
