Carnation DB

Dca22217.1

Annotation

8-exons
f-1
sp|D7TC95_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g00450#GO:0005852;GO:0005634;GO:0043022;GO:0003743;GO:0006446#2F1P2C
Os03t0182700-02 Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k).
Repeat List (scaffold223)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22217.1	10	234	234	79.91	225	84	6e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7TC95_VITVI	7	229	229	97.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22217.1	9	234	234	70.94	226	74	9e-100
Target_name	Start	End	Length	Cov(%)
Os03t0182700-02	2	226	227	99.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold223	Augus-PASA	mRNA	186440	188870	.	-	.	ID=Dca22217.1;Parent=Dca22217
scaffold223	Augus-PASA	exon	186440	186643	.	-	.	ID=Dca22217.1.exon1;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	186855	186937	.	-	.	ID=Dca22217.1.exon2;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	187574	187640	.	-	.	ID=Dca22217.1.exon3;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	187718	187768	.	-	.	ID=Dca22217.1.exon4;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	187878	187940	.	-	.	ID=Dca22217.1.exon5;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	188054	188104	.	-	.	ID=Dca22217.1.exon6;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	188206	188262	.	-	.	ID=Dca22217.1.exon7;Parent=Dca22217.1
scaffold223	Augus-PASA	exon	188742	188870	.	-	.	ID=Dca22217.1.exon8;Parent=Dca22217.1