Carnation DB

Dca228.1

Annotation

5-exons
f-1
sp|B9HVP7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805077#GO:0016021;GO:0005215;GO:0006857#1F1P1C
sp|B9S7C1_RICCO#Peptide transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0776160#GO:0016021;GO:0005215;GO:0006857#1F1P1C
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca228.1	6	459	465	56.98	454	46	3e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9HVP7_POPTR	5	582	584	98.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca228.1	24	460	465	52.47	437	44	8e-131
Target_name	Start	End	Length	Cov(%)
Os03t0719900-04	33	591	594	94.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	748625	750453	.	+	.	ID=Dca228.1;Parent=Dca228
scaffold10	Augustus	exon	748625	748681	.	+	.	ID=Dca228.1.exon1;Parent=Dca228.1
scaffold10	Augustus	exon	748790	748889	.	+	.	ID=Dca228.1.exon2;Parent=Dca228.1
scaffold10	Augustus	exon	748982	749199	.	+	.	ID=Dca228.1.exon3;Parent=Dca228.1
scaffold10	Augustus	exon	749278	749459	.	+	.	ID=Dca228.1.exon4;Parent=Dca228.1
scaffold10	Augustus	exon	749613	750453	.	+	.	ID=Dca228.1.exon5;Parent=Dca228.1