Carnation DB

Dca23073.1

Annotation

12-exons
f-1
sp|D7KDD1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_470409#unknown#0F0P0C
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1148818-1153895 REVERSE LENGTH=1082
Repeat List (scaffold230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23073.1	10	1084	1084	49.53	1075	46	0
Target_name	Start	End	Length	Cov(%)
sp\|D7KDD1_ARALL	3	1071	1071	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23073.1	7	1084	1084	48.7	1078	45	0
Target_name	Start	End	Length	Cov(%)
AT1G04300.3	4	1082	1082	99.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold230	Augustus	mRNA	185687	192586	.	-	.	ID=Dca23073.1;Parent=Dca23073
scaffold230	Augustus	exon	185687	187117	.	-	.	ID=Dca23073.1.exon1;Parent=Dca23073.1
scaffold230	Augustus	exon	187421	187625	.	-	.	ID=Dca23073.1.exon2;Parent=Dca23073.1
scaffold230	Augustus	exon	187704	187963	.	-	.	ID=Dca23073.1.exon3;Parent=Dca23073.1
scaffold230	Augustus	exon	188643	188793	.	-	.	ID=Dca23073.1.exon4;Parent=Dca23073.1
scaffold230	Augustus	exon	188877	188989	.	-	.	ID=Dca23073.1.exon5;Parent=Dca23073.1
scaffold230	Augustus	exon	189399	189747	.	-	.	ID=Dca23073.1.exon6;Parent=Dca23073.1
scaffold230	Augustus	exon	190103	190261	.	-	.	ID=Dca23073.1.exon7;Parent=Dca23073.1
scaffold230	Augustus	exon	190573	190702	.	-	.	ID=Dca23073.1.exon8;Parent=Dca23073.1
scaffold230	Augustus	exon	190803	190871	.	-	.	ID=Dca23073.1.exon9;Parent=Dca23073.1
scaffold230	Augustus	exon	190987	191075	.	-	.	ID=Dca23073.1.exon10;Parent=Dca23073.1
scaffold230	Augustus	exon	191532	191643	.	-	.	ID=Dca23073.1.exon11;Parent=Dca23073.1
scaffold230	Augustus	exon	192400	192586	.	-	.	ID=Dca23073.1.exon12;Parent=Dca23073.1