Carnation DB

Dca23185.1

Annotation

8-exons
f-1
sp|A5B6A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041904#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2310)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23185.1	1	277	278	57.55	277	58	1e-96
Target_name	Start	End	Length	Cov(%)
sp\|A5BQS5_VITVI	1928	2203	2204	12.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23185.1	898	1262	1577	7.22	365	30	9e-45
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	234	619	707	54.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2310	Augustus	mRNA	32190	41694	.	+	.	ID=Dca23185.1;Parent=Dca23185
scaffold2310	Augustus	exon	32190	32378	.	+	.	ID=Dca23185.1.exon1;Parent=Dca23185.1
scaffold2310	Augustus	exon	33536	33698	.	+	.	ID=Dca23185.1.exon2;Parent=Dca23185.1
scaffold2310	Augustus	exon	33845	33918	.	+	.	ID=Dca23185.1.exon3;Parent=Dca23185.1
scaffold2310	Augustus	exon	34213	34400	.	+	.	ID=Dca23185.1.exon4;Parent=Dca23185.1
scaffold2310	Augustus	exon	34945	35154	.	+	.	ID=Dca23185.1.exon5;Parent=Dca23185.1
scaffold2310	Augustus	exon	36684	39463	.	+	.	ID=Dca23185.1.exon6;Parent=Dca23185.1
scaffold2310	Augustus	exon	39546	40674	.	+	.	ID=Dca23185.1.exon7;Parent=Dca23185.1
scaffold2310	Augustus	exon	40836	41694	.	+	.	ID=Dca23185.1.exon8;Parent=Dca23185.1