Dca23405.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2334)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23405.1 |
105 |
683 |
692 |
48.98 |
579 |
58 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
326 |
901 |
964 |
59.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23405.1 |
213 |
687 |
692 |
24.71 |
475 |
35 |
8e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
1345 |
1401 |
33.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2334 |
Augustus |
mRNA |
83495 |
86633 |
. |
+ |
. |
ID=Dca23405.1;Parent=Dca23405 |
| scaffold2334 |
Augustus |
exon |
83495 |
83831 |
. |
+ |
. |
ID=Dca23405.1.exon1;Parent=Dca23405.1 |
| scaffold2334 |
Augustus |
exon |
84807 |
85076 |
. |
+ |
. |
ID=Dca23405.1.exon2;Parent=Dca23405.1 |
| scaffold2334 |
Augustus |
exon |
85162 |
86633 |
. |
+ |
. |
ID=Dca23405.1.exon3;Parent=Dca23405.1 |
