Carnation DB

Dca23415.1

Annotation

5-exons
f-1
sp|Q41499_SOLTU#Spliceosomal protein#Solanum tuberosum (Potato)#Name=U2B#GO:0000166;GO:0017069;GO:0000398#2F1P0C
Repeat List (scaffold2336)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23415.1	1	228	228	75.43	228	74	2e-97
Target_name	Start	End	Length	Cov(%)
sp\|Q41499_SOLTU	2	231	231	99.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23415.1	1	228	228	71.49	228	71	4e-97
Target_name	Start	End	Length	Cov(%)
AT2G30260.1	1	232	232	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2336	Augus-PASA	mRNA	42617	45559	.	+	.	ID=Dca23415.1;Parent=Dca23415
scaffold2336	Augus-PASA	exon	42617	42689	.	+	.	ID=Dca23415.1.exon1;Parent=Dca23415.1
scaffold2336	Augus-PASA	exon	42995	43167	.	+	.	ID=Dca23415.1.exon2;Parent=Dca23415.1
scaffold2336	Augus-PASA	exon	43355	43448	.	+	.	ID=Dca23415.1.exon3;Parent=Dca23415.1
scaffold2336	Augus-PASA	exon	45059	45135	.	+	.	ID=Dca23415.1.exon4;Parent=Dca23415.1
scaffold2336	Augus-PASA	exon	45290	45559	.	+	.	ID=Dca23415.1.exon5;Parent=Dca23415.1