Carnation DB

Dca23440.1

Annotation

12-exons
f-1
sp|D7SVZ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g00840#unknown#0F0P0C
AT5G66810.1 | Symbols: | CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). | chr5:26672926-26676450 FORWARD LENGTH=750
Repeat List (scaffold234)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23440.1	1	655	655	66.41	655	60	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SVZ3_VITVI	1	710	710	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23440.1	1	655	655	56.03	655	51	2e-177
Target_name	Start	End	Length	Cov(%)
AT5G66810.1	57	750	750	92.53

seqname	source	feature	start	end	score	strand	frame	group
scaffold234	Augustus	mRNA	77585	83901	.	+	.	ID=Dca23440.1;Parent=Dca23440
scaffold234	Augustus	exon	77585	77920	.	+	.	ID=Dca23440.1.exon1;Parent=Dca23440.1
scaffold234	Augustus	exon	78106	78207	.	+	.	ID=Dca23440.1.exon2;Parent=Dca23440.1
scaffold234	Augustus	exon	78309	78389	.	+	.	ID=Dca23440.1.exon3;Parent=Dca23440.1
scaffold234	Augustus	exon	79494	79510	.	+	.	ID=Dca23440.1.exon4;Parent=Dca23440.1
scaffold234	Augustus	exon	79690	79825	.	+	.	ID=Dca23440.1.exon5;Parent=Dca23440.1
scaffold234	Augustus	exon	80660	80758	.	+	.	ID=Dca23440.1.exon6;Parent=Dca23440.1
scaffold234	Augustus	exon	81649	81751	.	+	.	ID=Dca23440.1.exon7;Parent=Dca23440.1
scaffold234	Augustus	exon	81864	82165	.	+	.	ID=Dca23440.1.exon8;Parent=Dca23440.1
scaffold234	Augustus	exon	82358	82537	.	+	.	ID=Dca23440.1.exon9;Parent=Dca23440.1
scaffold234	Augustus	exon	82631	82828	.	+	.	ID=Dca23440.1.exon10;Parent=Dca23440.1
scaffold234	Augustus	exon	83372	83692	.	+	.	ID=Dca23440.1.exon11;Parent=Dca23440.1
scaffold234	Augustus	exon	83809	83901	.	+	.	ID=Dca23440.1.exon12;Parent=Dca23440.1