Carnation DB

Dca23443.1

Annotation

6-exons
f-1
sp|B9S8J4_RICCO#Short-chain dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0601700#GO:0000166;GO:0016491#2F0P0C
Repeat List (scaffold234)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23443.1	61	318	318	64.15	258	78	2e-111
Target_name	Start	End	Length	Cov(%)
sp\|B9S8J4_RICCO	3	264	264	99.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23443.1	69	314	318	55.34	246	69	3e-99
Target_name	Start	End	Length	Cov(%)
AT3G50560.1	13	270	272	94.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold234	Augustus	mRNA	141158	144768	.	+	.	ID=Dca23443.1;Parent=Dca23443
scaffold234	Augustus	exon	141158	141299	.	+	.	ID=Dca23443.1.exon1;Parent=Dca23443.1
scaffold234	Augustus	exon	142271	142438	.	+	.	ID=Dca23443.1.exon2;Parent=Dca23443.1
scaffold234	Augus-PASA	exon	142575	142837	.	+	.	ID=Dca23443.1.exon3;Parent=Dca23443.1
scaffold234	Augus-PASA	exon	143843	143936	.	+	.	ID=Dca23443.1.exon4;Parent=Dca23443.1
scaffold234	Augus-PASA	exon	144048	144159	.	+	.	ID=Dca23443.1.exon5;Parent=Dca23443.1
scaffold234	Augus-PASA	exon	144591	144768	.	+	.	ID=Dca23443.1.exon6;Parent=Dca23443.1