Dca23864.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|Q2R4N6_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g27850#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2382)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23864.1 |
1 |
387 |
387 |
65.89 |
387 |
54 |
2e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
615 |
1089 |
1553 |
30.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23864.1 |
1 |
302 |
387 |
34.62 |
302 |
35 |
6e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
996 |
1539 |
24.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2382 |
Augustus |
mRNA |
6456 |
7874 |
. |
+ |
. |
ID=Dca23864.1;Parent=Dca23864 |
| scaffold2382 |
Augustus |
exon |
6456 |
6674 |
. |
+ |
. |
ID=Dca23864.1.exon1;Parent=Dca23864.1 |
| scaffold2382 |
Augustus |
exon |
6792 |
7025 |
. |
+ |
. |
ID=Dca23864.1.exon2;Parent=Dca23864.1 |
| scaffold2382 |
Augustus |
exon |
7164 |
7874 |
. |
+ |
. |
ID=Dca23864.1.exon3;Parent=Dca23864.1 |
