Carnation DB

Dca25042.1

Annotation

6-exons
f-1
sp|D7THP0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g00340#GO:0005874;GO:0005524;GO:0003677;GO:0003777;GO:0006281;GO:0007018#3F2P1C
sp|B9T259_RICCO#Osmotic avoidance abnormal protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0915900#GO:0005874;GO:0005524;GO:0003677;GO:0003777;GO:0006281;GO:0007018#3F2P1C
Repeat List (scaffold249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25042.1	2	126	126	57.14	125	57	2e-31
Target_name	Start	End	Length	Cov(%)
sp\|D7THP0_VITVI	537	659	659	18.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25042.1	23	126	126	47.61	104	58	1e-28
Target_name	Start	End	Length	Cov(%)
AT5G02370.1	516	619	628	16.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold249	Augustus	mRNA	139318	140235	.	-	.	ID=Dca25042.1;Parent=Dca25042
scaffold249	Augustus	exon	139318	139362	.	-	.	ID=Dca25042.1.exon1;Parent=Dca25042.1
scaffold249	Augustus	exon	139452	139490	.	-	.	ID=Dca25042.1.exon2;Parent=Dca25042.1
scaffold249	Augustus	exon	139595	139657	.	-	.	ID=Dca25042.1.exon3;Parent=Dca25042.1
scaffold249	Augustus	exon	139813	139834	.	-	.	ID=Dca25042.1.exon4;Parent=Dca25042.1
scaffold249	Augustus	exon	139928	139974	.	-	.	ID=Dca25042.1.exon5;Parent=Dca25042.1
scaffold249	Augustus	exon	140071	140235	.	-	.	ID=Dca25042.1.exon6;Parent=Dca25042.1