Carnation DB

Dca25168.1

Annotation

6-exons
f-1
sp|B1PYP4_PINSY#Putative DNA ligase#Pinus sylvestris (Scots pine)#unknown#GO:0005524;GO:0003910;GO:0006310;GO:0006281#2F2P0C
Repeat List (scaffold25)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25168.1	81	179	217	23.5	99	49	1e-19
Target_name	Start	End	Length	Cov(%)
sp\|B1PYP4_PINSY	62	166	168	62.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25168.1	81	187	217	23.96	107	46	7e-20
Target_name	Start	End	Length	Cov(%)
AT1G08130.1	669	780	790	14.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold25	Augustus	mRNA	383153	386087	.	+	.	ID=Dca25168.1;Parent=Dca25168
scaffold25	Augustus	exon	383153	383405	.	+	.	ID=Dca25168.1.exon1;Parent=Dca25168.1
scaffold25	Augustus	exon	385159	385232	.	+	.	ID=Dca25168.1.exon2;Parent=Dca25168.1
scaffold25	Augustus	exon	385331	385369	.	+	.	ID=Dca25168.1.exon3;Parent=Dca25168.1
scaffold25	Augustus	exon	385587	385664	.	+	.	ID=Dca25168.1.exon4;Parent=Dca25168.1
scaffold25	Augustus	exon	385777	385854	.	+	.	ID=Dca25168.1.exon5;Parent=Dca25168.1
scaffold25	Augustus	exon	385956	386087	.	+	.	ID=Dca25168.1.exon6;Parent=Dca25168.1