Carnation DB

Dca25291.1

Annotation

8-exons
f-1
sp|B9SE20_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1482450#GO:0043531;GO:0006952#1F1P0C
sp|B9SE18_RICCO#Disease resistance protein RPP8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1482430#GO:0043531;GO:0004721;GO:0006952#2F1P0C
Repeat List (scaffold251)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25291.1	1	166	1374	4.94	166	33	1e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9SE20_RICCO	390	595	985	20.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25291.1	483	1187	1374	17.83	705	32	8e-82
Target_name	Start	End	Length	Cov(%)
AT5G48620.1	150	877	908	80.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold251	Augustus	mRNA	21329	36053	.	+	.	ID=Dca25291.1;Parent=Dca25291
scaffold251	Augustus	exon	21329	21795	.	+	.	ID=Dca25291.1.exon1;Parent=Dca25291.1
scaffold251	Augustus	exon	25983	26125	.	+	.	ID=Dca25291.1.exon2;Parent=Dca25291.1
scaffold251	Augustus	exon	26599	26869	.	+	.	ID=Dca25291.1.exon3;Parent=Dca25291.1
scaffold251	Augustus	exon	28293	28853	.	+	.	ID=Dca25291.1.exon4;Parent=Dca25291.1
scaffold251	Augustus	exon	31449	32651	.	+	.	ID=Dca25291.1.exon5;Parent=Dca25291.1
scaffold251	Augustus	exon	32740	32959	.	+	.	ID=Dca25291.1.exon6;Parent=Dca25291.1
scaffold251	Augustus	exon	34423	35332	.	+	.	ID=Dca25291.1.exon7;Parent=Dca25291.1
scaffold251	Augustus	exon	35704	36053	.	+	.	ID=Dca25291.1.exon8;Parent=Dca25291.1