Carnation DB

Dca26196.1

Annotation

5-exons
f-1
sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold260)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26196.1	485	585	585	8.54	101	44	2e-11
Target_name	Start	End	Length	Cov(%)
sp\|A5AFE2_VITVI	153	267	1269	9.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26196.1	387	479	585	5.98	93	36	3e-09
Target_name	Start	End	Length	Cov(%)
AT4G01170.1	339	436	444	22.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold260	Augustus	mRNA	31861	42468	.	-	.	ID=Dca26196.1;Parent=Dca26196
scaffold260	Augustus	exon	31861	32168	.	-	.	ID=Dca26196.1.exon1;Parent=Dca26196.1
scaffold260	Augustus	exon	40095	40137	.	-	.	ID=Dca26196.1.exon2;Parent=Dca26196.1
scaffold260	Augus-PASA	exon	40427	40509	.	-	.	ID=Dca26196.1.exon3;Parent=Dca26196.1
scaffold260	Augus-PASA	exon	41019	41241	.	-	.	ID=Dca26196.1.exon4;Parent=Dca26196.1
scaffold260	Augus-PASA	exon	41368	42468	.	-	.	ID=Dca26196.1.exon5;Parent=Dca26196.1