Dca26918.1
Annotation
- 3-exons
- f-1
- sp|B9N7R8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_673686#GO:0003677;GO:0046983#2F0P0C
- Os09t0101200-00 Similar to Transposon protein.
- Repeat List (scaffold2677)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26918.1 |
23 |
125 |
149 |
27.51 |
103 |
40 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7R8_POPTR |
551 |
653 |
662 |
15.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26918.1 |
21 |
125 |
149 |
26.84 |
105 |
39 |
6e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G42170.1 |
571 |
674 |
696 |
14.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2677 |
Augustus |
mRNA |
42493 |
43438 |
. |
- |
. |
ID=Dca26918.1;Parent=Dca26918 |
| scaffold2677 |
Augustus |
exon |
42493 |
42555 |
. |
- |
. |
ID=Dca26918.1.exon1;Parent=Dca26918.1 |
| scaffold2677 |
Augustus |
exon |
42672 |
42983 |
. |
- |
. |
ID=Dca26918.1.exon2;Parent=Dca26918.1 |
| scaffold2677 |
Augustus |
exon |
43364 |
43438 |
. |
- |
. |
ID=Dca26918.1.exon3;Parent=Dca26918.1 |
