Carnation DB

Dca29067.1

Annotation

5-exons
f-1
sp|Q1W2L0_SALBI#Putative CPF 0172 family protein#Salicornia bigelovii (Dwarf glasswort)#Name=UPF1#unknown#0F0P0C
Repeat List (scaffold29)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29067.1	3	202	202	75.74	200	77	3e-85
Target_name	Start	End	Length	Cov(%)
sp\|Q1W2L0_SALBI	2	198	198	99.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29067.1	3	201	202	65.34	199	66	3e-72
Target_name	Start	End	Length	Cov(%)
AT5G55940.1	7	207	208	96.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold29	Augus-PASA	mRNA	230292	233068	.	-	.	ID=Dca29067.1;Parent=Dca29067
scaffold29	Augus-PASA	exon	230292	230322	.	-	.	ID=Dca29067.1.exon1;Parent=Dca29067.1
scaffold29	Augus-PASA	exon	230404	230567	.	-	.	ID=Dca29067.1.exon2;Parent=Dca29067.1
scaffold29	Augus-PASA	exon	231409	231468	.	-	.	ID=Dca29067.1.exon3;Parent=Dca29067.1
scaffold29	Augus-PASA	exon	231597	231743	.	-	.	ID=Dca29067.1.exon4;Parent=Dca29067.1
scaffold29	Augustus	exon	232862	233068	.	-	.	ID=Dca29067.1.exon5;Parent=Dca29067.1