Dca29150.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2903)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29150.1 |
144 |
323 |
335 |
31.04 |
180 |
58 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
515 |
692 |
1313 |
13.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29150.1 |
146 |
292 |
335 |
17.31 |
147 |
39 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
484 |
633 |
1428 |
10.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2903 |
Augustus |
mRNA |
10688 |
12170 |
. |
+ |
. |
ID=Dca29150.1;Parent=Dca29150 |
| scaffold2903 |
Augustus |
exon |
10688 |
11059 |
. |
+ |
. |
ID=Dca29150.1.exon1;Parent=Dca29150.1 |
| scaffold2903 |
Augustus |
exon |
11269 |
11320 |
. |
+ |
. |
ID=Dca29150.1.exon2;Parent=Dca29150.1 |
| scaffold2903 |
Augustus |
exon |
11587 |
12170 |
. |
+ |
. |
ID=Dca29150.1.exon3;Parent=Dca29150.1 |
