Carnation DB

Dca29521.1

Annotation

5-exons
f-1
sp|Q5ZDD7_ORYSJ#Putative uncharacterized protein P0537A05.43#Oryza sativa subsp japonica (Rice)#Name=P0537A05.43#unknown#0F0P0C
AT1G02475.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:514110-515331 REVERSE LENGTH=219
Repeat List (scaffold2942)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29521.1	67	183	189	43.38	117	70	9e-46
Target_name	Start	End	Length	Cov(%)
sp\|Q5ZDD7_ORYSJ	75	192	199	59.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29521.1	65	182	189	43.38	118	54	2e-38
Target_name	Start	End	Length	Cov(%)
AT1G02475.1	67	218	219	69.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2942	Augustus	mRNA	75070	77446	.	+	.	ID=Dca29521.1;Parent=Dca29521
scaffold2942	Augustus	exon	75070	75302	.	+	.	ID=Dca29521.1.exon1;Parent=Dca29521.1
scaffold2942	Augustus	exon	75392	75491	.	+	.	ID=Dca29521.1.exon2;Parent=Dca29521.1
scaffold2942	Augustus	exon	75588	75683	.	+	.	ID=Dca29521.1.exon3;Parent=Dca29521.1
scaffold2942	Augustus	exon	77077	77124	.	+	.	ID=Dca29521.1.exon4;Parent=Dca29521.1
scaffold2942	Augustus	exon	77354	77446	.	+	.	ID=Dca29521.1.exon5;Parent=Dca29521.1