Carnation DB

Dca29564.1

Annotation

8-exons
f-1
sp|A9PA76_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_672515#GO:0016881;GO:0005524#2F0P0C
Os01t0673600-01 Similar to Ubiquitin-conjugating enzyme E2.
Repeat List (scaffold295)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29564.1	1	153	153	98.03	153	99	4e-84
Target_name	Start	End	Length	Cov(%)
sp\|A9PA76_POPTR	1	153	153	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29564.1	1	153	153	96.73	153	97	4e-84
Target_name	Start	End	Length	Cov(%)
Os01t0673600-01	1	153	154	99.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold295	Augus-PASA	mRNA	55663	59990	.	-	.	ID=Dca29564.1;Parent=Dca29564
scaffold295	Augus-PASA	exon	55663	55700	.	-	.	ID=Dca29564.1.exon1;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	55914	56011	.	-	.	ID=Dca29564.1.exon2;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	56259	56332	.	-	.	ID=Dca29564.1.exon3;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	56421	56462	.	-	.	ID=Dca29564.1.exon4;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	57895	57953	.	-	.	ID=Dca29564.1.exon5;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	59108	59194	.	-	.	ID=Dca29564.1.exon6;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	59826	59853	.	-	.	ID=Dca29564.1.exon7;Parent=Dca29564.1
scaffold295	Augus-PASA	exon	59955	59990	.	-	.	ID=Dca29564.1.exon8;Parent=Dca29564.1