Carnation DB

Dca29654.1

Annotation

10-exons
f-1
sp|F6HXG7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g07520#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
sp|B9RVA4_RICCO#Formamidopyrimidine-DNA glycosylase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0901410#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
Repeat List (scaffold2960)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29654.1	1	340	399	60.9	340	70	1e-139
Target_name	Start	End	Length	Cov(%)
sp\|F6HXG7_VITVI	1	350	410	85.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29654.1	1	296	399	54.88	296	74	2e-128
Target_name	Start	End	Length	Cov(%)
AT1G52500.2	1	297	390	76.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2960	Augus-PASA	mRNA	23672	28005	.	+	.	ID=Dca29654.1;Parent=Dca29654
scaffold2960	Augus-PASA	exon	23672	23900	.	+	.	ID=Dca29654.1.exon1;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	24702	24753	.	+	.	ID=Dca29654.1.exon2;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	25223	25280	.	+	.	ID=Dca29654.1.exon3;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	25404	25472	.	+	.	ID=Dca29654.1.exon4;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	25553	25678	.	+	.	ID=Dca29654.1.exon5;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	26264	26314	.	+	.	ID=Dca29654.1.exon6;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	26455	26532	.	+	.	ID=Dca29654.1.exon7;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	26771	26873	.	+	.	ID=Dca29654.1.exon8;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	27320	27354	.	+	.	ID=Dca29654.1.exon9;Parent=Dca29654.1
scaffold2960	Augus-PASA	exon	27607	28005	.	+	.	ID=Dca29654.1.exon10;Parent=Dca29654.1