Carnation DB

Dca29682.1

Annotation

9-exons
f-1
sp|D7SKC8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g05030#GO:0016021;GO:0005524;GO:0004222;GO:0017111;GO:0008270;GO:0030163;GO:0006508#4F2P1C
Os05t0458400-01 Similar to AAA-metalloprotease FtsH.
Repeat List (scaffold2964)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29682.1	539	1064	1067	32.23	526	66	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SKC8_VITVI	253	775	820	63.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29682.1	600	1064	1067	30.74	465	71	0
Target_name	Start	End	Length	Cov(%)
Os05t0458400-01	313	778	823	56.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2964	Augustus	mRNA	32444	37161	.	+	.	ID=Dca29682.1;Parent=Dca29682
scaffold2964	Augustus	exon	32444	32680	.	+	.	ID=Dca29682.1.exon1;Parent=Dca29682.1
scaffold2964	Augustus	exon	32768	32914	.	+	.	ID=Dca29682.1.exon2;Parent=Dca29682.1
scaffold2964	Augustus	exon	33002	33769	.	+	.	ID=Dca29682.1.exon3;Parent=Dca29682.1
scaffold2964	Augus-PASA	exon	33950	34177	.	+	.	ID=Dca29682.1.exon4;Parent=Dca29682.1
scaffold2964	Augustus	exon	34263	34574	.	+	.	ID=Dca29682.1.exon5;Parent=Dca29682.1
scaffold2964	Augustus	exon	35199	35354	.	+	.	ID=Dca29682.1.exon6;Parent=Dca29682.1
scaffold2964	Augustus	exon	35629	36399	.	+	.	ID=Dca29682.1.exon7;Parent=Dca29682.1
scaffold2964	Augustus	exon	36493	36720	.	+	.	ID=Dca29682.1.exon8;Parent=Dca29682.1
scaffold2964	Augustus	exon	36805	37161	.	+	.	ID=Dca29682.1.exon9;Parent=Dca29682.1