Carnation DB

Dca29943.1

Annotation

6-exons
f-1
sp|B9H8B8_POPTR#Homocysteine s-methyltransferase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HMT5#GO:0008898#1F0P0C
Repeat List (scaffold2993)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29943.1	6	285	288	76.04	280	79	6e-133
Target_name	Start	End	Length	Cov(%)
sp\|B9H8B8_POPTR	10	289	341	82.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29943.1	8	285	288	73.95	278	77	2e-124
Target_name	Start	End	Length	Cov(%)
AT3G63250.1	9	284	333	82.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2993	Augustus	mRNA	576	3275	.	+	.	ID=Dca29943.1;Parent=Dca29943
scaffold2993	Augustus	exon	576	740	.	+	.	ID=Dca29943.1.exon1;Parent=Dca29943.1
scaffold2993	Augustus	exon	1670	1726	.	+	.	ID=Dca29943.1.exon2;Parent=Dca29943.1
scaffold2993	Augustus	exon	1970	2196	.	+	.	ID=Dca29943.1.exon3;Parent=Dca29943.1
scaffold2993	Augustus	exon	2601	2730	.	+	.	ID=Dca29943.1.exon4;Parent=Dca29943.1
scaffold2993	Augustus	exon	2839	3042	.	+	.	ID=Dca29943.1.exon5;Parent=Dca29943.1
scaffold2993	Augustus	exon	3192	3275	.	+	.	ID=Dca29943.1.exon6;Parent=Dca29943.1