Dca29960.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2996)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29960.1 |
78 |
319 |
980 |
9.38 |
242 |
39 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
246 |
1717 |
13.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29960.1 |
753 |
975 |
980 |
7.75 |
223 |
35 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
440 |
707 |
28.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2996 |
Augustus |
mRNA |
37717 |
41743 |
. |
+ |
. |
ID=Dca29960.1;Parent=Dca29960 |
| scaffold2996 |
Augustus |
exon |
37717 |
38683 |
. |
+ |
. |
ID=Dca29960.1.exon1;Parent=Dca29960.1 |
| scaffold2996 |
Augustus |
exon |
39631 |
40058 |
. |
+ |
. |
ID=Dca29960.1.exon2;Parent=Dca29960.1 |
| scaffold2996 |
Augustus |
exon |
40197 |
41743 |
. |
+ |
. |
ID=Dca29960.1.exon3;Parent=Dca29960.1 |
