Carnation DB

Dca30143.1

Annotation

8-exons
f-1
sp|F6HG59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g02810#unknown#0F0P0C
AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink). | chr3:289218-292557 FORWARD LENGTH=921
Repeat List (scaffold300)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30143.1	1	865	866	49.76	865	46	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HG59_VITVI	1	903	904	99.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30143.1	1	865	866	42.03	865	39	1e-164
Target_name	Start	End	Length	Cov(%)
AT3G01810.1	1	920	921	99.89

seqname	source	feature	start	end	score	strand	frame	group
scaffold300	Augustus	mRNA	162536	166154	.	-	.	ID=Dca30143.1;Parent=Dca30143
scaffold300	Augustus	exon	162536	162868	.	-	.	ID=Dca30143.1.exon1;Parent=Dca30143.1
scaffold300	Augustus	exon	163069	163182	.	-	.	ID=Dca30143.1.exon2;Parent=Dca30143.1
scaffold300	Augustus	exon	163319	163471	.	-	.	ID=Dca30143.1.exon3;Parent=Dca30143.1
scaffold300	Augustus	exon	163565	163738	.	-	.	ID=Dca30143.1.exon4;Parent=Dca30143.1
scaffold300	Augustus	exon	163864	164082	.	-	.	ID=Dca30143.1.exon5;Parent=Dca30143.1
scaffold300	Augustus	exon	164161	164416	.	-	.	ID=Dca30143.1.exon6;Parent=Dca30143.1
scaffold300	Augustus	exon	164522	165234	.	-	.	ID=Dca30143.1.exon7;Parent=Dca30143.1
scaffold300	Augustus	exon	165516	166154	.	-	.	ID=Dca30143.1.exon8;Parent=Dca30143.1