Dca30479.1
Annotation
- 3-exons
- f-1
- sp|D7T9H0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g02130#GO:0016998#0F1P0C
- AT5G08200.1 | Symbols: | peptidoglycan-binding LysM domain-containing protein | chr5:2638385-2640508 FORWARD LENGTH=409
- Repeat List (scaffold3043)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30479.1 |
71 |
383 |
383 |
46.73 |
313 |
54 |
3e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T9H0_VITVI |
68 |
398 |
398 |
83.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30479.1 |
63 |
383 |
383 |
47.78 |
321 |
53 |
7e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G08200.1 |
70 |
409 |
409 |
83.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3043 |
Augustus |
mRNA |
31509 |
34702 |
. |
- |
. |
ID=Dca30479.1;Parent=Dca30479 |
| scaffold3043 |
Augustus |
exon |
31509 |
32256 |
. |
- |
. |
ID=Dca30479.1.exon1;Parent=Dca30479.1 |
| scaffold3043 |
Augustus |
exon |
33658 |
33788 |
. |
- |
. |
ID=Dca30479.1.exon2;Parent=Dca30479.1 |
| scaffold3043 |
Augustus |
exon |
34430 |
34702 |
. |
- |
. |
ID=Dca30479.1.exon3;Parent=Dca30479.1 |
