Dca31820.1
Annotation
- 3-exons
- f-1
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3210)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31820.1 |
11 |
728 |
761 |
32.32 |
718 |
32 |
2e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L4J8_SOLDE |
3 |
716 |
1065 |
67.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31820.1 |
8 |
226 |
761 |
8.67 |
219 |
30 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
10 |
231 |
237 |
93.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3210 |
Augustus |
mRNA |
4394 |
7180 |
. |
+ |
. |
ID=Dca31820.1;Parent=Dca31820 |
| scaffold3210 |
Augustus |
exon |
4394 |
5212 |
. |
+ |
. |
ID=Dca31820.1.exon1;Parent=Dca31820.1 |
| scaffold3210 |
Augustus |
exon |
5273 |
5995 |
. |
+ |
. |
ID=Dca31820.1.exon2;Parent=Dca31820.1 |
| scaffold3210 |
Augustus |
exon |
6437 |
7180 |
. |
+ |
. |
ID=Dca31820.1.exon3;Parent=Dca31820.1 |
