Dca3227.1
Annotation
- 2-exons
- f-1
- sp|F6HZS2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04530#GO:0005488#1F0P0C
- sp|B9SS03_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0519570#GO:0005488#1F0P0C
- Repeat List (scaffold1114)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3227.1 |
9 |
393 |
393 |
53.43 |
385 |
55 |
2e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HZS2_VITVI |
90 |
472 |
743 |
51.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3227.1 |
9 |
393 |
393 |
51.14 |
385 |
52 |
3e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G32415.1 |
91 |
473 |
761 |
50.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1114 |
Augustus |
mRNA |
79515 |
80948 |
. |
- |
. |
ID=Dca3227.1;Parent=Dca3227 |
| scaffold1114 |
Augustus |
exon |
79515 |
80675 |
. |
- |
. |
ID=Dca3227.1.exon1;Parent=Dca3227.1 |
| scaffold1114 |
Augustus |
exon |
80928 |
80948 |
. |
- |
. |
ID=Dca3227.1.exon2;Parent=Dca3227.1 |
