Carnation DB

Dca32802.1

Annotation

7-exons
f-1
sp|C5XVV1_SORBI#Putative uncharacterized protein Sb04g037070#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb04g037070#GO:0008236;GO:0006508#1F1P0C
sp|Q41376_SPIOL#C-terminal protease#Spinacia oleracea (Spinach)#unknown#GO:0008236;GO:0006508#1F1P0C
Repeat List (scaffold333)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32802.1	52	261	261	57.08	210	67	7e-81
Target_name	Start	End	Length	Cov(%)
sp\|C5XVV1_SORBI	8	231	232	96.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32802.1	1	123	261	31.03	123	66	5e-42
Target_name	Start	End	Length	Cov(%)
AT4G17740.1	176	298	515	23.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold333	Augus-PASA	mRNA	16748	21439	.	-	.	ID=Dca32802.1;Parent=Dca32802
scaffold333	Augus-PASA	exon	16748	16873	.	-	.	ID=Dca32802.1.exon1;Parent=Dca32802.1
scaffold333	Augus-PASA	exon	17100	17193	.	-	.	ID=Dca32802.1.exon2;Parent=Dca32802.1
scaffold333	Augus-PASA	exon	17279	17376	.	-	.	ID=Dca32802.1.exon3;Parent=Dca32802.1
scaffold333	Augus-PASA	exon	17728	17836	.	-	.	ID=Dca32802.1.exon4;Parent=Dca32802.1
scaffold333	Augus-PASA	exon	19879	19947	.	-	.	ID=Dca32802.1.exon5;Parent=Dca32802.1
scaffold333	Augustus	exon	20981	21189	.	-	.	ID=Dca32802.1.exon6;Parent=Dca32802.1
scaffold333	Augustus	exon	21359	21439	.	-	.	ID=Dca32802.1.exon7;Parent=Dca32802.1