Dca32849.1
Annotation
- 2-exons
- f-1
- sp|E0CPL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g13890#unknown#0F0P0C
- AT5G39600.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:15854188-15854771 REVERSE LENGTH=127
- Repeat List (scaffold3334)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32849.1 |
1 |
128 |
128 |
75 |
128 |
75 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E0CPL1_VITVI |
1 |
128 |
128 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32849.1 |
1 |
127 |
128 |
72.65 |
127 |
74 |
2e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G39600.1 |
1 |
127 |
127 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3334 |
Augustus |
mRNA |
33014 |
33484 |
. |
- |
. |
ID=Dca32849.1;Parent=Dca32849 |
| scaffold3334 |
Augustus |
exon |
33014 |
33043 |
. |
- |
. |
ID=Dca32849.1.exon1;Parent=Dca32849.1 |
| scaffold3334 |
Augustus |
exon |
33128 |
33484 |
. |
- |
. |
ID=Dca32849.1.exon2;Parent=Dca32849.1 |
