Carnation DB

Dca32883.1

Annotation

6-exons
f-1
sp|F6HQ90_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g00120#GO:0004144#1F0P0C
Os01t0681000-01 Uncharacterised protein family UPF0089 domain containing protein.
Repeat List (scaffold334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32883.1	1	456	461	57.91	456	59	2e-162
Target_name	Start	End	Length	Cov(%)
sp\|F6HQ90_VITVI	6	454	461	97.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32883.1	6	456	461	37.09	451	36	8e-80
Target_name	Start	End	Length	Cov(%)
Os01t0681000-01	48	520	532	88.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold334	Augus-PASA	mRNA	30717	33761	.	+	.	ID=Dca32883.1;Parent=Dca32883
scaffold334	Augus-PASA	exon	30717	31457	.	+	.	ID=Dca32883.1.exon1;Parent=Dca32883.1
scaffold334	Augus-PASA	exon	31670	31742	.	+	.	ID=Dca32883.1.exon2;Parent=Dca32883.1
scaffold334	Augus-PASA	exon	31834	31901	.	+	.	ID=Dca32883.1.exon3;Parent=Dca32883.1
scaffold334	Augus-PASA	exon	32323	32535	.	+	.	ID=Dca32883.1.exon4;Parent=Dca32883.1
scaffold334	Augus-PASA	exon	33187	33324	.	+	.	ID=Dca32883.1.exon5;Parent=Dca32883.1
scaffold334	Augus-PASA	exon	33609	33761	.	+	.	ID=Dca32883.1.exon6;Parent=Dca32883.1