Dca33761.1
Annotation
- 2-exons
- f-1
- sp|Q7XGG1_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g09220#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold3457)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33761.1 |
3 |
587 |
613 |
53.83 |
585 |
57 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7XGG1_ORYSJ |
1112 |
1695 |
1707 |
34.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33761.1 |
471 |
586 |
613 |
6.52 |
116 |
35 |
3e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1367 |
1475 |
1539 |
7.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3457 |
Augustus |
mRNA |
27067 |
29140 |
. |
+ |
. |
ID=Dca33761.1;Parent=Dca33761 |
| scaffold3457 |
Augustus |
exon |
27067 |
28463 |
. |
+ |
. |
ID=Dca33761.1.exon1;Parent=Dca33761.1 |
| scaffold3457 |
Augustus |
exon |
28696 |
29140 |
. |
+ |
. |
ID=Dca33761.1.exon2;Parent=Dca33761.1 |
