Dca33841.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold347)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33841.1 |
1 |
325 |
382 |
55.23 |
325 |
65 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
581 |
964 |
34.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33841.1 |
2 |
319 |
382 |
32.72 |
318 |
34 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
652 |
1019 |
1401 |
26.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold347 |
Augustus |
mRNA |
39650 |
44315 |
. |
+ |
. |
ID=Dca33841.1;Parent=Dca33841 |
| scaffold347 |
Augustus |
exon |
39650 |
40624 |
. |
+ |
. |
ID=Dca33841.1.exon1;Parent=Dca33841.1 |
| scaffold347 |
Augustus |
exon |
44142 |
44315 |
. |
+ |
. |
ID=Dca33841.1.exon2;Parent=Dca33841.1 |
