Carnation DB

Dca34140.1

Annotation

6-exons
f-1
sp|Q2R1R7_ORYSJ#AT hook motif-containing protein, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g38300#GO:0005524;GO:0004386#2F0P0C
Repeat List (scaffold3508)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34140.1	171	567	591	29.61	397	44	2e-95
Target_name	Start	End	Length	Cov(%)
sp\|Q2R1R7_ORYSJ	275	669	1618	24.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34140.1	171	449	591	22.33	279	47	2e-71
Target_name	Start	End	Length	Cov(%)
Os05t0523100-01	32	312	313	89.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3508	Augustus	mRNA	16022	19520	.	+	.	ID=Dca34140.1;Parent=Dca34140
scaffold3508	Augustus	exon	16022	16203	.	+	.	ID=Dca34140.1.exon1;Parent=Dca34140.1
scaffold3508	Augustus	exon	16755	16834	.	+	.	ID=Dca34140.1.exon2;Parent=Dca34140.1
scaffold3508	Augustus	exon	17212	17307	.	+	.	ID=Dca34140.1.exon3;Parent=Dca34140.1
scaffold3508	Augustus	exon	17930	18022	.	+	.	ID=Dca34140.1.exon4;Parent=Dca34140.1
scaffold3508	Augustus	exon	18109	18174	.	+	.	ID=Dca34140.1.exon5;Parent=Dca34140.1
scaffold3508	Augustus	exon	18262	19520	.	+	.	ID=Dca34140.1.exon6;Parent=Dca34140.1