Dca34738.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3590)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34738.1 |
13 |
263 |
321 |
42.67 |
251 |
43 |
8e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
407 |
728 |
1717 |
18.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34738.1 |
79 |
170 |
321 |
9.34 |
92 |
33 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
188 |
192 |
47.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3590 |
Augustus |
mRNA |
11268 |
12439 |
. |
- |
. |
ID=Dca34738.1;Parent=Dca34738 |
| scaffold3590 |
Augustus |
exon |
11268 |
11572 |
. |
- |
. |
ID=Dca34738.1.exon1;Parent=Dca34738.1 |
| scaffold3590 |
Augustus |
exon |
11698 |
12192 |
. |
- |
. |
ID=Dca34738.1.exon2;Parent=Dca34738.1 |
| scaffold3590 |
Augustus |
exon |
12274 |
12439 |
. |
- |
. |
ID=Dca34738.1.exon3;Parent=Dca34738.1 |
