Carnation DB

Dca34793.1

Annotation

11-exons
f-1
sp|D7LQ08_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_484143#unknown#0F0P0C
AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3 | chr2:560976-562961 FORWARD LENGTH=303
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34793.1	10	289	289	80.96	280	84	5e-140
Target_name	Start	End	Length	Cov(%)
sp\|D7LQ08_ARALL	28	308	308	91.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34793.1	10	289	289	80.96	280	84	4e-140
Target_name	Start	End	Length	Cov(%)
AT2G02180.1	23	303	303	92.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	117421	121139	.	+	.	ID=Dca34793.1;Parent=Dca34793
scaffold36	Augus-PASA	exon	117421	117576	.	+	.	ID=Dca34793.1.exon1;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	118224	118314	.	+	.	ID=Dca34793.1.exon2;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	118418	118470	.	+	.	ID=Dca34793.1.exon3;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	118562	118654	.	+	.	ID=Dca34793.1.exon4;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	118783	118854	.	+	.	ID=Dca34793.1.exon5;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	119700	119772	.	+	.	ID=Dca34793.1.exon6;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	119872	119917	.	+	.	ID=Dca34793.1.exon7;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	120486	120549	.	+	.	ID=Dca34793.1.exon8;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	120645	120698	.	+	.	ID=Dca34793.1.exon9;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	120826	120903	.	+	.	ID=Dca34793.1.exon10;Parent=Dca34793.1
scaffold36	Augus-PASA	exon	121050	121139	.	+	.	ID=Dca34793.1.exon11;Parent=Dca34793.1