Carnation DB

Dca34797.1

Annotation

9-exons
f-1
sp|B9HB30_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561342#GO:0005785;GO:0005525;GO:0003924;GO:0005047;GO:0006614#3F1P1C
AT4G30600.1 | Symbols: | signal recognition particle receptor alpha subunit family protein | chr4:14938142-14940600 REVERSE LENGTH=634
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34797.1	1	622	622	77	622	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HB30_POPTR	1	624	624	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34797.1	1	622	622	76.84	622	75	0
Target_name	Start	End	Length	Cov(%)
AT4G30600.1	1	634	634	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	138126	141661	.	-	.	ID=Dca34797.1;Parent=Dca34797
scaffold36	Augus-PASA	exon	138126	138251	.	-	.	ID=Dca34797.1.exon1;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	138786	138869	.	-	.	ID=Dca34797.1.exon2;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	138979	139104	.	-	.	ID=Dca34797.1.exon3;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	139216	139335	.	-	.	ID=Dca34797.1.exon4;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	139411	139518	.	-	.	ID=Dca34797.1.exon5;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	139603	139755	.	-	.	ID=Dca34797.1.exon6;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	139862	139957	.	-	.	ID=Dca34797.1.exon7;Parent=Dca34797.1
scaffold36	Augus-PASA	exon	140509	140593	.	-	.	ID=Dca34797.1.exon8;Parent=Dca34797.1
scaffold36	Augustus	exon	140691	141661	.	-	.	ID=Dca34797.1.exon9;Parent=Dca34797.1