Carnation DB

Dca35293.1

Annotation

5-exons
f-1
sp|B9S154_RICCO#Leucine-rich repeat transmembrane protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0633880#GO:0016021;GO:0032440;GO:0005524;GO:0004674#3F0P1C
Repeat List (scaffold3663)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35293.1	81	159	345	17.1	79	72	9e-28
Target_name	Start	End	Length	Cov(%)
sp\|B9S154_RICCO	699	780	994	8.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35293.1	79	202	345	20	124	49	2e-25
Target_name	Start	End	Length	Cov(%)
AT5G46330.1	865	1004	1173	11.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3663	Augustus	mRNA	11007	14205	.	+	.	ID=Dca35293.1;Parent=Dca35293
scaffold3663	Augustus	exon	11007	11061	.	+	.	ID=Dca35293.1.exon1;Parent=Dca35293.1
scaffold3663	Augustus	exon	11516	11702	.	+	.	ID=Dca35293.1.exon2;Parent=Dca35293.1
scaffold3663	Augustus	exon	11816	12296	.	+	.	ID=Dca35293.1.exon3;Parent=Dca35293.1
scaffold3663	Augustus	exon	12427	12591	.	+	.	ID=Dca35293.1.exon4;Parent=Dca35293.1
scaffold3663	Augustus	exon	14056	14205	.	+	.	ID=Dca35293.1.exon5;Parent=Dca35293.1