Dca36382.1
Annotation
- 3-exons
- f-1
- sp|O65452_ARATH#LTR retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g22040#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3817)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36382.1 |
1 |
600 |
600 |
43.66 |
600 |
40 |
3e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O65452_ARATH |
491 |
1109 |
1109 |
55.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36382.1 |
207 |
308 |
600 |
5.33 |
102 |
30 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
54 |
161 |
1262 |
8.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3817 |
Augustus |
mRNA |
37320 |
39560 |
. |
+ |
. |
ID=Dca36382.1;Parent=Dca36382 |
| scaffold3817 |
Augustus |
exon |
37320 |
38171 |
. |
+ |
. |
ID=Dca36382.1.exon1;Parent=Dca36382.1 |
| scaffold3817 |
Augustus |
exon |
38481 |
38764 |
. |
+ |
. |
ID=Dca36382.1.exon2;Parent=Dca36382.1 |
| scaffold3817 |
Augustus |
exon |
38894 |
39560 |
. |
+ |
. |
ID=Dca36382.1.exon3;Parent=Dca36382.1 |
