Dca36512.1
Annotation
- 3-exons
- f-1
- sp|B9N865_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584442#unknown#0F0P0C
- AT2G28105.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:11976764-11977713 FORWARD LENGTH=166
- Repeat List (scaffold384)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36512.1 |
9 |
153 |
156 |
58.33 |
145 |
63 |
3e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N865_POPTR |
13 |
155 |
160 |
89.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36512.1 |
4 |
150 |
156 |
47.43 |
147 |
49 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G28105.1 |
5 |
149 |
166 |
87.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold384 |
Augustus |
mRNA |
122336 |
122975 |
. |
- |
. |
ID=Dca36512.1;Parent=Dca36512 |
| scaffold384 |
Augustus |
exon |
122336 |
122505 |
. |
- |
. |
ID=Dca36512.1.exon1;Parent=Dca36512.1 |
| scaffold384 |
Augustus |
exon |
122602 |
122722 |
. |
- |
. |
ID=Dca36512.1.exon2;Parent=Dca36512.1 |
| scaffold384 |
Augustus |
exon |
122796 |
122975 |
. |
- |
. |
ID=Dca36512.1.exon3;Parent=Dca36512.1 |
