Dca37379.1
Annotation
- 2-exons
- f-1
- sp|Q2R1A9_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g39790#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold398)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37379.1 |
1 |
129 |
129 |
64.34 |
129 |
56 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R1A9_ORYSJ |
1000 |
1148 |
1784 |
8.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37379.1 |
6 |
129 |
129 |
41.86 |
124 |
42 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
412 |
539 |
707 |
18.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold398 |
Augustus |
mRNA |
165815 |
166374 |
. |
+ |
. |
ID=Dca37379.1;Parent=Dca37379 |
| scaffold398 |
Augustus |
exon |
165815 |
165895 |
. |
+ |
. |
ID=Dca37379.1.exon1;Parent=Dca37379.1 |
| scaffold398 |
Augustus |
exon |
166066 |
166374 |
. |
+ |
. |
ID=Dca37379.1.exon2;Parent=Dca37379.1 |
