Carnation DB

Dca38983.1

Annotation

5-exons
f-1
sp|B9RW32_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1175680#unknown#0F0P0C
AT2G14830.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:6362524-6365818 FORWARD LENGTH=454
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38983.1	10	186	406	17.73	177	41	2e-36
Target_name	Start	End	Length	Cov(%)
sp\|B9RW32_RICCO	2	178	647	27.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38983.1	10	184	406	16.99	175	40	7e-33
Target_name	Start	End	Length	Cov(%)
AT2G14830.1	72	246	454	38.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	266847	268585	.	-	.	ID=Dca38983.1;Parent=Dca38983
scaffold42	Augustus	exon	266847	267479	.	-	.	ID=Dca38983.1.exon1;Parent=Dca38983.1
scaffold42	Augustus	exon	267563	267848	.	-	.	ID=Dca38983.1.exon2;Parent=Dca38983.1
scaffold42	Augustus	exon	267951	268054	.	-	.	ID=Dca38983.1.exon3;Parent=Dca38983.1
scaffold42	Augustus	exon	268161	268293	.	-	.	ID=Dca38983.1.exon4;Parent=Dca38983.1
scaffold42	Augustus	exon	268521	268585	.	-	.	ID=Dca38983.1.exon5;Parent=Dca38983.1