Carnation DB

Dca40006.1

Annotation

5-exons
f-1
sp|B9IEZ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_252336#GO:0005524;GO:0017111#2F0P0C
AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12745752-12748995 REVERSE LENGTH=475
Repeat List (scaffold436)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40006.1	21	238	261	45.97	218	56	1e-52
Target_name	Start	End	Length	Cov(%)
sp\|B9IEZ9_POPTR	104	253	410	36.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40006.1	39	238	261	43.29	200	57	2e-50
Target_name	Start	End	Length	Cov(%)
AT4G24710.1	177	313	475	28.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold436	Augustus	mRNA	161973	164207	.	+	.	ID=Dca40006.1;Parent=Dca40006
scaffold436	Augustus	exon	161973	162061	.	+	.	ID=Dca40006.1.exon1;Parent=Dca40006.1
scaffold436	Augustus	exon	162166	162189	.	+	.	ID=Dca40006.1.exon2;Parent=Dca40006.1
scaffold436	Augustus	exon	162891	162995	.	+	.	ID=Dca40006.1.exon3;Parent=Dca40006.1
scaffold436	Augustus	exon	163269	163539	.	+	.	ID=Dca40006.1.exon4;Parent=Dca40006.1
scaffold436	Augustus	exon	163911	164207	.	+	.	ID=Dca40006.1.exon5;Parent=Dca40006.1