Dca40023.1
Annotation
- 4-exons
- f-1
- sp|A5BTQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007696#GO:0008270#1F0P0C
- Os06t0704400-02 Transposase, MuDR, plant domain containing protein.
- Repeat List (scaffold4362)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40023.1 |
247 |
547 |
552 |
20.47 |
301 |
36 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BTQ2_VITVI |
92 |
368 |
632 |
43.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40023.1 |
399 |
548 |
552 |
11.05 |
150 |
41 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
218 |
366 |
805 |
18.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4362 |
Augustus |
mRNA |
14248 |
16475 |
. |
+ |
. |
ID=Dca40023.1;Parent=Dca40023 |
| scaffold4362 |
Augustus |
exon |
14248 |
14681 |
. |
+ |
. |
ID=Dca40023.1.exon1;Parent=Dca40023.1 |
| scaffold4362 |
Augustus |
exon |
15004 |
15152 |
. |
+ |
. |
ID=Dca40023.1.exon2;Parent=Dca40023.1 |
| scaffold4362 |
Augustus |
exon |
15222 |
15764 |
. |
+ |
. |
ID=Dca40023.1.exon3;Parent=Dca40023.1 |
| scaffold4362 |
Augustus |
exon |
15943 |
16475 |
. |
+ |
. |
ID=Dca40023.1.exon4;Parent=Dca40023.1 |
