Dca40117.1
Annotation
- 4-exons
- f-1
- sp|A5AL35_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032464#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold438)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40117.1 |
8 |
197 |
650 |
11.69 |
190 |
40 |
8e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AL35_VITVI |
14 |
173 |
685 |
23.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40117.1 |
473 |
587 |
650 |
6.76 |
115 |
39 |
5e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
635 |
749 |
1401 |
8.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold438 |
Augustus |
mRNA |
29725 |
32192 |
. |
+ |
. |
ID=Dca40117.1;Parent=Dca40117 |
| scaffold438 |
Augustus |
exon |
29725 |
30314 |
. |
+ |
. |
ID=Dca40117.1.exon1;Parent=Dca40117.1 |
| scaffold438 |
Augustus |
exon |
30394 |
30587 |
. |
+ |
. |
ID=Dca40117.1.exon2;Parent=Dca40117.1 |
| scaffold438 |
Augustus |
exon |
30660 |
31300 |
. |
+ |
. |
ID=Dca40117.1.exon3;Parent=Dca40117.1 |
| scaffold438 |
Augustus |
exon |
31665 |
32192 |
. |
+ |
. |
ID=Dca40117.1.exon4;Parent=Dca40117.1 |
