Carnation DB

Dca40231.1

Annotation

9-exons
f-1
sp|B9HHW2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_656310#unknown#0F0P0C
AT3G56130.1 | Symbols: | biotin/lipoyl attachment domain-containing protein | chr3:20826852-20829007 FORWARD LENGTH=281
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40231.1	1	277	277	56.67	277	57	5e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9HHW2_POPTR	1	259	260	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40231.1	1	277	277	52.7	277	51	1e-63
Target_name	Start	End	Length	Cov(%)
AT3G56130.1	1	279	281	99.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augus-PASA	mRNA	185113	188638	.	+	.	ID=Dca40231.1;Parent=Dca40231
scaffold44	Augus-PASA	exon	185113	185146	.	+	.	ID=Dca40231.1.exon1;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	186260	186448	.	+	.	ID=Dca40231.1.exon2;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	186939	187003	.	+	.	ID=Dca40231.1.exon3;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	187253	187306	.	+	.	ID=Dca40231.1.exon4;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	187591	187842	.	+	.	ID=Dca40231.1.exon5;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	187947	188009	.	+	.	ID=Dca40231.1.exon6;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	188185	188253	.	+	.	ID=Dca40231.1.exon7;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	188342	188387	.	+	.	ID=Dca40231.1.exon8;Parent=Dca40231.1
scaffold44	Augus-PASA	exon	188577	188638	.	+	.	ID=Dca40231.1.exon9;Parent=Dca40231.1