Carnation DB

Dca40358.1

Annotation

8-exons
f-1
sp|B9HTB3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726104#GO:0004316;GO:0051287;GO:0006633#2F1P0C
Os02t0503500-01 Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase).
Repeat List (scaffold4417)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40358.1	1	199	199	88.44	199	89	3e-102
Target_name	Start	End	Length	Cov(%)
sp\|B9HTB3_POPTR	126	324	324	61.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40358.1	1	199	199	76.38	199	77	3e-90
Target_name	Start	End	Length	Cov(%)
Os02t0503500-01	114	312	313	63.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4417	Augustus	mRNA	28214	30315	.	-	.	ID=Dca40358.1;Parent=Dca40358
scaffold4417	Augustus	exon	28214	28246	.	-	.	ID=Dca40358.1.exon1;Parent=Dca40358.1
scaffold4417	Augustus	exon	28327	28409	.	-	.	ID=Dca40358.1.exon2;Parent=Dca40358.1
scaffold4417	Augustus	exon	28578	28671	.	-	.	ID=Dca40358.1.exon3;Parent=Dca40358.1
scaffold4417	Augustus	exon	28794	28928	.	-	.	ID=Dca40358.1.exon4;Parent=Dca40358.1
scaffold4417	Augustus	exon	29762	29794	.	-	.	ID=Dca40358.1.exon5;Parent=Dca40358.1
scaffold4417	Augustus	exon	29879	29973	.	-	.	ID=Dca40358.1.exon6;Parent=Dca40358.1
scaffold4417	Augustus	exon	30113	30158	.	-	.	ID=Dca40358.1.exon7;Parent=Dca40358.1
scaffold4417	Augustus	exon	30235	30315	.	-	.	ID=Dca40358.1.exon8;Parent=Dca40358.1