Dca40380.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold442)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40380.1 |
72 |
736 |
854 |
35.71 |
665 |
44 |
1e-139
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
687 |
1717 |
39.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40380.1 |
551 |
643 |
854 |
3.74 |
93 |
35 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold442 |
Augustus |
mRNA |
74977 |
79579 |
. |
- |
. |
ID=Dca40380.1;Parent=Dca40380 |
| scaffold442 |
Augustus |
exon |
74977 |
75098 |
. |
- |
. |
ID=Dca40380.1.exon1;Parent=Dca40380.1 |
| scaffold442 |
Augustus |
exon |
77043 |
77277 |
. |
- |
. |
ID=Dca40380.1.exon2;Parent=Dca40380.1 |
| scaffold442 |
Augustus |
exon |
77372 |
79579 |
. |
- |
. |
ID=Dca40380.1.exon3;Parent=Dca40380.1 |
