Carnation DB

Dca40498.1

Annotation

5-exons
f-2
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold444)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40498.1	147	449	454	21.58	303	30	9e-25
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	1069	1399	1399	23.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40498.1	9	150	454	11.89	142	37	1e-22
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	480	627	829	17.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold444	Augustus	mRNA	116	1847	.	+	.	ID=Dca40498.1;Parent=Dca40498
scaffold444	Augustus	exon	116	683	.	+	.	ID=Dca40498.1.exon1;Parent=Dca40498.1
scaffold444	Augustus	exon	779	908	.	+	.	ID=Dca40498.1.exon2;Parent=Dca40498.1
scaffold444	Augustus	exon	1006	1172	.	+	.	ID=Dca40498.1.exon3;Parent=Dca40498.1
scaffold444	Augustus	exon	1263	1373	.	+	.	ID=Dca40498.1.exon4;Parent=Dca40498.1
scaffold444	Augustus	exon	1458	1847	.	+	.	ID=Dca40498.1.exon5;Parent=Dca40498.1