Carnation DB

Dca41618.1

Annotation

11-exons
f-1
sp|B9RT90_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0682050#unknown#0F0P0C
AT3G16730.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). | chr3:5695633-5698863 REVERSE LENGTH=683
Repeat List (scaffold4624)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41618.1	15	674	674	52.22	660	53	4e-176
Target_name	Start	End	Length	Cov(%)
sp\|B9RT90_RICCO	13	667	667	98.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41618.1	8	670	674	49.55	663	49	2e-159
Target_name	Start	End	Length	Cov(%)
AT3G16730.1	4	667	683	97.21

seqname	source	feature	start	end	score	strand	frame	group
scaffold4624	Augustus	mRNA	7991	13743	.	+	.	ID=Dca41618.1;Parent=Dca41618
scaffold4624	Augustus	exon	7991	8183	.	+	.	ID=Dca41618.1.exon1;Parent=Dca41618.1
scaffold4624	Augustus	exon	8295	8394	.	+	.	ID=Dca41618.1.exon2;Parent=Dca41618.1
scaffold4624	Augustus	exon	10665	10768	.	+	.	ID=Dca41618.1.exon3;Parent=Dca41618.1
scaffold4624	Augustus	exon	10878	11017	.	+	.	ID=Dca41618.1.exon4;Parent=Dca41618.1
scaffold4624	Augustus	exon	11106	11553	.	+	.	ID=Dca41618.1.exon5;Parent=Dca41618.1
scaffold4624	Augustus	exon	11640	11806	.	+	.	ID=Dca41618.1.exon6;Parent=Dca41618.1
scaffold4624	Augustus	exon	11883	12029	.	+	.	ID=Dca41618.1.exon7;Parent=Dca41618.1
scaffold4624	Augustus	exon	12184	12282	.	+	.	ID=Dca41618.1.exon8;Parent=Dca41618.1
scaffold4624	Augustus	exon	12829	12930	.	+	.	ID=Dca41618.1.exon9;Parent=Dca41618.1
scaffold4624	Augustus	exon	13061	13216	.	+	.	ID=Dca41618.1.exon10;Parent=Dca41618.1
scaffold4624	Augus-PASA	exon	13375	13743	.	+	.	ID=Dca41618.1.exon11;Parent=Dca41618.1