Carnation DB

Dca41808.1

Annotation

18-exons
f-1
sp|D7SI75_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06610#GO:0004176;GO:0008270;GO:0006508#2F1P0C
AT1G18660.4 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr1:6421433-6425489 FORWARD LENGTH=491
Repeat List (scaffold466)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41808.1	1	489	489	65.43	489	66	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SI75_VITVI	1	486	486	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41808.1	1	479	489	61.14	479	63	8e-171
Target_name	Start	End	Length	Cov(%)
AT1G18660.4	1	476	491	96.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold466	Augustus	mRNA	124032	134381	.	+	.	ID=Dca41808.1;Parent=Dca41808
scaffold466	Augustus	exon	124032	124106	.	+	.	ID=Dca41808.1.exon1;Parent=Dca41808.1
scaffold466	Augustus	exon	125113	125214	.	+	.	ID=Dca41808.1.exon2;Parent=Dca41808.1
scaffold466	Augustus	exon	126374	126456	.	+	.	ID=Dca41808.1.exon3;Parent=Dca41808.1
scaffold466	Augustus	exon	126554	126638	.	+	.	ID=Dca41808.1.exon4;Parent=Dca41808.1
scaffold466	Augustus	exon	127189	127275	.	+	.	ID=Dca41808.1.exon5;Parent=Dca41808.1
scaffold466	Augustus	exon	127695	127756	.	+	.	ID=Dca41808.1.exon6;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	128111	128304	.	+	.	ID=Dca41808.1.exon7;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	128391	128451	.	+	.	ID=Dca41808.1.exon8;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	129141	129318	.	+	.	ID=Dca41808.1.exon9;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	130297	130335	.	+	.	ID=Dca41808.1.exon10;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	130419	130480	.	+	.	ID=Dca41808.1.exon11;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	130573	130609	.	+	.	ID=Dca41808.1.exon12;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	131246	131295	.	+	.	ID=Dca41808.1.exon13;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	131372	131441	.	+	.	ID=Dca41808.1.exon14;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	133092	133167	.	+	.	ID=Dca41808.1.exon15;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	133613	133692	.	+	.	ID=Dca41808.1.exon16;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	133783	133851	.	+	.	ID=Dca41808.1.exon17;Parent=Dca41808.1
scaffold466	Augus-PASA	exon	134322	134381	.	+	.	ID=Dca41808.1.exon18;Parent=Dca41808.1